MOMD: Mouse Oral Microbiome Database

MOMD Genome Explorer

Selected genome: Shigella flexneri 19428wH2_1568

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from a total of 52 genomes

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NCBI Genome Annotation:

contigs: 237

bases: 5,139,722 bps

CDS: 5,034

rRNA: 13

tRNA: 87

tmRNA: 1

Total number of protein coding genes annotated/found: 4,833

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Molecule ^	PID/GenBank ID *^	Sequences	Size (NA/AA) ^	Range	Gene Product Name
SEQF5015\|JADGKR010000079.1	MBF0743686.1	NA AA	168/56	1-168	IS3 family transposase
SEQF5015\|JADGKR010000083.1	MBF0743697.1	NA AA	2141/713	1-2141	rhs element protein RhsB
SEQF5015\|JADGKR010000087.1	MBF0743701.1	NA AA	1419/473	1-1420	autotransporter outer membrane beta-barrel domain-containing protein
SEQF5015\|JADGKR010000088.1	MBF0743702.1	NA AA	615/205	1-616	RHS repeat-associated core domain-containing protein
SEQF5015\|JADGKR010000092.1	MBF0743709.1	NA AA	1221/407	1-1221	phage portal protein
SEQF5015\|JADGKR010000095.1	MBF0743712.1	NA AA	1100/366	1-1100	glutamate decarboxylase
SEQF5015\|JADGKR010000099.1	MBF0743718.1	NA AA	992/330	1-993	RTX toxin
SEQF5015\|JADGKR010000100.1	MBF0743719.1	NA AA	956/318	1-956	elongation factor Tu
SEQF5015\|JADGKR010000103.1	MBF0743722.1	NA AA	741/247	1-741	NAD(P)/FAD-dependent oxidoreductase
SEQF5015\|JADGKR010000107.1	MBF0743725.1	NA AA	168/56	1-170	DUF4754 family protein
SEQF5015\|JADGKR010000110.1	MBF0743730.1	NA AA	705/235	1-706	ISAs1-like element ISEc1 family transposase
SEQF5015\|JADGKR010000112.1	MBF0743733.1	NA AA	609/203	1-611	nitrite reductase
SEQF5015\|JADGKR010000115.1	MBF0743736.1	NA AA	581/193	1-581	hypothetical protein
SEQF5015\|JADGKR010000116.1	MBF0743737.1	NA AA	396/132	1-397	ribonucleoside reductase
SEQF5015\|JADGKR010000117.1	MBF0743738.1	NA AA	144/48	1-146	DUF2214 family protein
SEQF5015\|JADGKR010000118.1	MBF0743740.1	NA AA	571/190	1-571	thiazole synthase
SEQF5015\|JADGKR010000121.1	MBF0743742.1	NA AA	554/184	1-555	apolipoprotein N-acyltransferase
SEQF5015\|JADGKR010000126.1	MBF0743748.1	NA AA	533/177	1-534	tripartite tricarboxylate transporter substrate binding protein
SEQF5015\|JADGKR010000130.1	MBF0743751.1	NA AA	529/176	1-531	hypothetical protein
SEQF5015\|JADGKR010000131.1	MBF0743752.1	NA AA	529/176	1-530	aminotransferase class V-fold PLP-dependent enzyme

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Page last updated: July 7, 2021 08:39:35